Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904039.1_cds_XP_016454180.1_48232
CDS Infomation

[gene=LOC107778440] [db_xref=GeneID:107778440] [protein=tropomyosin-like] [protein_id=XP_016454180.1] [location=complement(join(4320..4434,4524..4585,4690..4770,5473..5628,5746..5910,6400..6462,6744..6806,6910..6963,8901..8957,9053..9121,9223..9408,9681..9808,11648..11828))] [gbkey=CDS]
Sequence

ATGGCATTATCATTGAGAGTCATATTATTCACTCTCTTCATTTTTATTACACTCATTTTT
ACACAGATCAAAGTTGAAGCTGAATCATCATCTGTGAATAATGATGAACTGGAACATGTT
CAATCCCATGATTCCAATTCTCAAGAATTGGACCATCTTAAGTCCAAGATCCAATCTTTG
GAATCAAATGTGGAGGAGACGGCTATGGAACTGAAGCAGAAGGATGAAGTCATTGCTGAC
AAGGAGAATATGATTAAAGAGAAATCAGAGAGTATTGCTTCATTGCTAGCCGAGATAGCT
TCTCTCCAAAAAAAAGGTACATTAGATGCTGAGGAGCAAGTTAGAAAGGCTCACGCACTA
GTTTATCAACTAGAAAATCAAGTCGACAAACTGAAAATGGAAGTTGATATGAAAAATAAG
GAGAAAAAAGAGCTGGGAGCCCAAATAAATGAAGCAGAGAAGAGAGCAACTGAATTGAAT
TCAAAAGTTGAGAAGCTTCAAAAGACTGTTGACGAGCAGAAGGCAAAACTAAGAAAAACT
GAACGGGCTCTTCAAATTGCTGAGGAGGAAATGATTAGAGCTAGATCCGAAGCCATGTCA
AAAAGTCAGCAGCTCGGAGAGGTGCATGGTGCATGGCTTCCACCTTGGCTTGCCGTTCGT
TTCATTCATTTCCAGTCTATTTTGGAGAAGCACTGGATAGAGCACGGAAAACCTGCTATG
GACATAGTGATTCAGAAGGCTACTGAAAAGAAGGCCCAAGCTGAAACATGGGCTGCACCA
CATGTGGAAACAATCAAAACACAATGGATACCAGCTGCGAAGGAGAAGTGGGTGGTGATT
TCCACTACCGCCGAGCCACATATAGAATTGCTAACTACTAGAGCTCTTGAAATTTACGAG
ACATCTAAAGGCGCCATAACTCCACATATCATCAAGGTTCAAGAACTAGCAACTCCTCAT
GTTCAGGAAATTAAGAAATTCAGCAAGCCGTACATTGATGACGTCGCCACTGCTGCAAAA
CCACATGTTGAAAAAGTTCGTGTTGCTGTCAAGCCGTACACAGAGGTGGCGGTTCATCAT
TATGGGAAGTTCCTTGAGTCTGCAACGACATACCATGATCAGCTTCAAGGCACAGTCAAA
GAAACACTAGAGAAGCATGACGTTACAAGATCTCTTGCGACAAAGGAGCTGGTTTGGTTT
GCTGCCTCGGCATTGTTGGCTTTGCCCATTATAGTTCTGTTCAAGCTTTTGTCTTCCATC
TTCTGCACAAAGGCAAAGGAATCCGATCGCACTGGTAATTCACACCATTCACGTCGTAAG
GCCAAGAGGGGTCATCCAGACAAGAGTGTAACGGAAGTTGACTTTGTTCATCAAAACTAA

Peptide Sequence

PEP ID

XP_016454180.1
PEP Infomation

PREDICTED: tropomyosin-like [Nicotiana tabacum]
Sequence

MALSLRVILFTLFIFITLIFTQIKVEAESSSVNNDELEHVQSHDSNSQELDHLKSKIQSL
ESNVEETAMELKQKDEVIADKENMIKEKSESIASLLAEIASLQKKGTLDAEEQVRKAHAL
VYQLENQVDKLKMEVDMKNKEKKELGAQINEAEKRATELNSKVEKLQKTVDEQKAKLRKT
ERALQIAEEEMIRARSEAMSKSQQLGEVHGAWLPPWLAVRFIHFQSILEKHWIEHGKPAM
DIVIQKATEKKAQAETWAAPHVETIKTQWIPAAKEKWVVISTTAEPHIELLTTRALEIYE
TSKGAITPHIIKVQELATPHVQEIKKFSKPYIDDVATAAKPHVEKVRVAVKPYTEVAVHH
YGKFLESATTYHDQLQGTVKETLEKHDVTRSLATKELVWFAASALLALPIIVLFKLLSSI
FCTKAKESDRTGNSHHSRRKAKRGHPDKSVTEVDFVHQN

Transcript Sequence

Gene sequence data has not been registered.